BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008B10LP1|AL425816
(837 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1542 1657 0.0
>3x_Contig1542
Length = 13810
Score = 1657 bits (835), Expect = 0.0
Identities = 836/837 (99%)
Strand = Plus / Plus
Query: 1 ggtttatcggatccttatgatgcgtcctcgacagacgctgatgcatctctctttaaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5115 ggtttatcggatccttatgatgcgtcctcgacagacgctgatgcatctctctttaaaaga 5174
Query: 61 gagcaaacagcggagtttgatttgaaattcgccttgaataagctatttcggaatagcatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5175 gagcaaacagcggagtttgatttgaaattcgccttgaataagctatttcggaatagcatt 5234
Query: 121 atcatatgggcctgcatccacttatttcaattagtcatttgtatcattttctaagtaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5235 atcatatgggcctgcatccacttatttcaattagtcatttgtatcattttctaagtaact 5294
Query: 181 atgtctcttgatagatgcaatacgtctatcaacaatcatcttccacgtttaacaagctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5295 atgtctcttgatagatgcaatacgtctatcaacaatcatcttccacgtttaacaagctca 5354
Query: 241 tctcatcatcaacctcttaaattccagttaaggtcaatttttaaaaatttttcacaaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5355 tctcatcatcaacctcttaaattccagttaaggtcaatttttaaaaatttttcacaaaag 5414
Query: 301 gcataaatgtatacataggaacaatataagttggcctggcaagagggtcaaaaatagcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5415 gcataaatgtatacataggaacaatataagttggcctggcaagagggtcaaaaatagcac 5474
Query: 361 cacaataacccgttaacttctgggtgatcggtaccactatagatagtgctttctgaaata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5475 cacaataacccgttaacttctgggtgatcggtaccactatagatagtgctttctgaaata 5534
Query: 421 accaaaaaagaggtattttaactttttttcatcgcaggatatacaaaagtcacctttacc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5535 accaaaaaagaggtattttaactttttttcatcgcaggatatacaaaagtcacctttacc 5594
Query: 481 gatctacttataacgaaaccttagaaggtacctcagcaaagaggcatactaaacgttcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5595 gatctacttataacgaaaccttagaaggtacctcagcaaagaggcatactaaacgttcaa 5654
Query: 541 aatggcacatagaaaactccagcaggagatagatcgtgtcttcaaaaaggtcaatgaagg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5655 aatggcacatagaaaactccagcaggagatagatcgtgtcttcaaaaaggtcaatgaagg 5714
Query: 601 ccttgagatttttgatatgtattatgagagacatgagaattgtgtcaataatccatcaca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5715 ccttgagatttttgatatgtattatgagagacatgagaattgtgtcaataatccatcaca 5774
Query: 661 aaaagataaattggratctgatttgaagagagaggttaaaaagcttcaacgacttaggga 720
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5775 aaaagataaattggaatctgatttgaagagagaggttaaaaagcttcaacgacttaggga 5834
Query: 721 acagattaaatcatggcaaagttctcccgaggtgaaagataaagattctcttttgaatca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5835 acagattaaatcatggcaaagttctcccgaggtgaaagataaagattctcttttgaatca 5894
Query: 781 taggcgatcggtggaagtagcgatggaaaaatataaagctgtcgaaaaggcttcaaa 837
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5895 taggcgatcggtggaagtagcgatggaaaaatataaagctgtcgaaaaggcttcaaa 5951
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7076
Number of Sequences: 1807
Number of extensions: 7076
Number of successful extensions: 66
Number of sequences better than 1.0e-20: 1
length of query: 837
length of database: 10,358,551
effective HSP length: 16
effective length of query: 821
effective length of database: 10,329,639
effective search space: 8480633619
effective search space used: 8480633619
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)